Quick info
Kevin R. Coombes has worked on 25 packages so far. In total, Kevin R. Coombes has worked with 34 other authors on those packages. Impressive teamwork!
Packages overview
Package details
| BimodalIndex | The Bimodality Index |
| CEDA | CRISPR Screen and Gene Expression Differential Analysis Lianbo Yu , Yue Zhao , Kevin R. Coombes , Lang Li |
| ClassComparison | Classes and Methods for "Class Comparison" Problems on Microarrays |
| ClassDiscovery | Classes and Methods for "Class Discovery" with Microarrays or Proteomics |
| CloneSeeker | Seeking and Finding Clones in Copy Number and Sequencing Data Kevin R. Coombes , Mark Zucker |
| CrossValidate | Classes and Methods for Cross Validation of "Class Prediction" Algorithms |
| GenAlgo | Classes and Methods to Use Genetic Algorithms for Feature Selection |
| Mercator | Clustering and Visualizing Distance Matrices Kevin R. Coombes , Caitlin E. Coombes |
| Modeler | Classes and Methods for Training and Using Binary Prediction Models |
| NameNeedle | Using Needleman-Wunsch to Match Sample Names |
| NewmanOmics | Extending the Newman Studentized Range Statistic to Transcriptomics Zachary Abrams , Greg Gershkowitz , Anoushka Joglekar , Chao Liu , Kevin R. Coombes |
| PCDimension | Finding the Number of Significant Principal Components |
| Polychrome | Qualitative Palettes with Many Colors |
| PreProcess | Basic Functions for Pre-Processing Microarrays |
| RCytoGPS | Using Cytogenetics Data in R Kevin R. Coombes , Dwayne Tally |
| RPPASPACE | Reverse-Phase Protein Array Super Position and Concentration Evaluation James M. Melott , Paul L. Roebuck , Kevin R. Coombes , Zhenlin Ju , Huma Shehwana , Shwetha V. Kumar , E. Shannon Neeley , Corwin Joy , Jianhua Hu , Keith A. Baggerly , Rehan Akbani , Mary A. Rohrdanz , Chris Wakefield , Doris R. Siwak , Yiling Lu , Bradley M. Broom , John N. Weinstein , Gordon B. Mills |
| SIBERG | Systematic Identification of Bimodally Expressed Genes Using RNAseq Data |
| SillyPutty | Silly Putty Clustering Kevin R. Coombes , Dwayne Tally |
| TailRank | The Tail-Rank Statistic |
| Thresher | Threshing and Reaping for Principal Components |
| Umpire | Simulating Realistic Gene Expression and Clinical Data Kevin R. Coombes , Jiexin Zhang , Caitlin E. Coombes |
| WayFindR | Computing Graph Structures on WikiPathways Kevin R. Coombes , Polina Bombina |
| oompaBase | Class Unions, Matrix Operations, and Color Schemes for OOMPA |
| oompaData | Data to Illustrate OOMPA Algorithms |
| plasma | Partial LeAst Squares for Multiomic Analysis Kevin R. Coombes , Kyoko Yamaguchi , Salma Abdelbaky |